Infobiotics workbench is a computational framework implementing a synergy between executable biology, multi-compartmental stochastic simulations, formal model analysis and structural/parameter model optimisation for computational systems and synthetic biology.
For more information and download, see the Infobiotics website.
ssapredict is a web service designed to automate the process of determining the fastest stochastic simulation algorithm (SSA) for a bio-chemical model. It calculates the topological properties of a model to predict the best performing algorithm.
Go here to the ssapredict webservice.